PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds

Orkun BABACAN; Bülent BAŞ; Barış SAREYYÜPOĞLU

doi:10.33988/auvfd.603515

Kısa Bildiri

Yıl 2020, Cilt: 67 Sayı: 2, 201 - 204, 03.03.2020

Orkun BABACAN Bülent BAŞ Barış SAREYYÜPOĞLU

https://doi.org/10.33988/auvfd.603515

Cited By: 2

Öz

Kaynakça

1. Aranaz A, Liebana E, Mateos A, et al (1997): Laboratory diagnosis of avian mycobacteriosis. Semin Avian Exotic Pet Med, 6, 9-17.
2. Bougiouklis P, Brelleu G, Fragkiadaki E, et al (2005): Outbreak of avian mycobacteriosis in a flock of two-year-old domestic pigeons (Columba livia f. domestica). Avian Dis, 49, 442- 445.
3. Böttger EC, Hirschel B, Coyle MB (1993): Mycobacterium genavense sp. nov. Int J Syst Bacteriol, 43, 841- 843.
4. Hoop RK, Böttger EC, Ossent P, et al (1993): Mycobacteriosis due to mycobacterium genavense in six pet birds. J Clin Microbiol, 31, 990- 993.
5. Hoop RK, Böttger EC, Pfyffer GE (1996): Etiological Agents of Mycobacterioses in Pet Birds between 1986 and 1995. J Clin Microbiol, 34, 991- 992.
6. Ikonomopoulos J, Fragkiadaki E, Liandris E, et al (2009): Estimation of the spread of pathogenic mycobacteria in organic broiler farms by the polymerase chain reaction. Vet Microbiol, 133, 278- 282.
7. Kiehn TE, Hoefer H, Bottger EC, et al (1996): Mycobacterium genavense ınfections in pet animals. J Clin Microbiol, 34, 1840- 1842.
8. Ledwon A, Szeleszczuk P, Malicka E, et al (2009): Mycobacteriosis caused by Mycobacterium genavense in Lineolated Parakeets (Bolborhynchus lineola). A case report. Bull Vet Inst Pulawy, 53, 209-212.
9. Lennox AM. (2007): Mycobacteriosis in companion psittacine birds: a review. J Avian Med Surg, 21, 181- 187.
10. Manarolla G, Liandris E, Pisoni G, et al (2009): Avian mycobacteriosis in companion birds: 20-year survey. Vet Microbiol, 133, 323- 327.
11. Mendenhall MK, Ford SL, Emerson CL, et al (2000): Detection and differentiation of Mycobacterium avium and Mycobacterium genavense by polymerase chain reaction and restriction enzyme digestion analysis. J Vet Diagn Invest, 12, 57- 60.
12. OIE Terrestrial Manuel (2008): Avian tuberculosis. Available at https://www.oie.int/doc/ged/D7710.PDF. (Accessed January 10, 2019)
13. Patino LCW, Monge O, Suzan G, et al (2018): Molecular Detection of Mycobacterium avium avium and Mycobacterium genavense in feces of free-living scarlet macaw (Ara macao) in Costa Rica. J Vildl Dis, 54, 357-361.
14. Portales F, Realini L, Bauwens L, et al (1996): Mycobacteriosis caused by Mycobacterium genavense in birds kept in a zoo: 11- year survey. J Clin Microbiol, 34, 319- 323. 15. Ramis A, Ferrer L, Aranaz A, et al (1996): Mycobacterium genavense infections in canaries. Avian Dis, 40, 246- 251.
16. Schmitz A, Korbel R, Thiel S, et al (2018): High prevalence of Mycobacterium genavense within flocks of pet birds. Vet Microbiol, 218, 40-44.
17. Shitaye JL, Halouzka R, Svobodova J, et al (2010): First isolation of Mycobacterium genavense in a blue headed parrot (Pionus menstruus) important from Surinam (South America) to the Czech Republic: a case report. Vet Med- Czech, 55, 339-347.
18. Sutherland M, Courtman N, Sacks P, et al (2018): Severe leukemoid response associated with Mycobacterium genavense infection in a pet budgerigar (Melopsittacus undulatus). J Exot Pet Med, 27, 11-16.
19. Tell LA, Leutenegger CM, Larsen RS, et al (2003): Real-time polymerase chain reaction testing for the detection of Mycobacterium genavense and Mycobacterium avium complex species in avian samples. Avian Dis, 47, 1406-1415.
20. Tell LA, Woods L, Cromie RL (2001): Mycobacteriosis in birds. Rev sci tech Off int Epiz, 20, 180-203.
21. Untergasser A, Cutcutache I, Koressaar T, et al (2012): Primer3- new capabilities and interfaces. Nucleic Acids Res, 40, e115.
22. Witte CL, Hungerford LL, Papendick R, et al (2008): Investigation of characteristics and factors associated with avian mycobacteriosis in zoo birds. J Vet Diagn Invest, 20, 186–196.

PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds

Yıl 2020, Cilt: 67 Sayı: 2, 201 - 204, 03.03.2020

Orkun BABACAN Bülent BAŞ Barış SAREYYÜPOĞLU

https://doi.org/10.33988/auvfd.603515

Cited By: 2

Öz

In this study, pathogenic mycobacteria were investigated in fecal samples of caged birds by PCR. A total of 47 feces samples collected from 4 different aviaries in Ankara. DNA extraction from fecal samples was performed with a commercial kit using spin column technology. PCR was performed with designed primers respectively amplifying 274 base pairs (bp), 128 bp, 102 bp and 219 bp nucleotide sequences of specific genes (16SrRNA, ISI245, IS901 and hypothetical 21kDa protein gene) of Mycobacterium spp., Mycobacterium avium complex (MAC), Mycobacterium avium subsp. Avium and Mycobacterium genavense, respectively. Five samples were positive and harbored the sequence for the Mycobacterium spp., of 4 of these 5 samples was identified as M. genavense by PCR. As a conclusion of this study, which is the first announcement of the detection of M. genavense DNA in fecal samples of caged birds in Turkey, PCR was seen to be a rapid, sensitive, and a reliable method in detection of avian mycobacteriosis.

Anahtar Kelimeler

Bird, Feces, Mycobacteriosis, Mycobacterium genavense

Kaynakça

1. Aranaz A, Liebana E, Mateos A, et al (1997): Laboratory diagnosis of avian mycobacteriosis. Semin Avian Exotic Pet Med, 6, 9-17.
2. Bougiouklis P, Brelleu G, Fragkiadaki E, et al (2005): Outbreak of avian mycobacteriosis in a flock of two-year-old domestic pigeons (Columba livia f. domestica). Avian Dis, 49, 442- 445.
3. Böttger EC, Hirschel B, Coyle MB (1993): Mycobacterium genavense sp. nov. Int J Syst Bacteriol, 43, 841- 843.
4. Hoop RK, Böttger EC, Ossent P, et al (1993): Mycobacteriosis due to mycobacterium genavense in six pet birds. J Clin Microbiol, 31, 990- 993.
5. Hoop RK, Böttger EC, Pfyffer GE (1996): Etiological Agents of Mycobacterioses in Pet Birds between 1986 and 1995. J Clin Microbiol, 34, 991- 992.
6. Ikonomopoulos J, Fragkiadaki E, Liandris E, et al (2009): Estimation of the spread of pathogenic mycobacteria in organic broiler farms by the polymerase chain reaction. Vet Microbiol, 133, 278- 282.
7. Kiehn TE, Hoefer H, Bottger EC, et al (1996): Mycobacterium genavense ınfections in pet animals. J Clin Microbiol, 34, 1840- 1842.
8. Ledwon A, Szeleszczuk P, Malicka E, et al (2009): Mycobacteriosis caused by Mycobacterium genavense in Lineolated Parakeets (Bolborhynchus lineola). A case report. Bull Vet Inst Pulawy, 53, 209-212.
9. Lennox AM. (2007): Mycobacteriosis in companion psittacine birds: a review. J Avian Med Surg, 21, 181- 187.
10. Manarolla G, Liandris E, Pisoni G, et al (2009): Avian mycobacteriosis in companion birds: 20-year survey. Vet Microbiol, 133, 323- 327.
11. Mendenhall MK, Ford SL, Emerson CL, et al (2000): Detection and differentiation of Mycobacterium avium and Mycobacterium genavense by polymerase chain reaction and restriction enzyme digestion analysis. J Vet Diagn Invest, 12, 57- 60.
12. OIE Terrestrial Manuel (2008): Avian tuberculosis. Available at https://www.oie.int/doc/ged/D7710.PDF. (Accessed January 10, 2019)
13. Patino LCW, Monge O, Suzan G, et al (2018): Molecular Detection of Mycobacterium avium avium and Mycobacterium genavense in feces of free-living scarlet macaw (Ara macao) in Costa Rica. J Vildl Dis, 54, 357-361.
14. Portales F, Realini L, Bauwens L, et al (1996): Mycobacteriosis caused by Mycobacterium genavense in birds kept in a zoo: 11- year survey. J Clin Microbiol, 34, 319- 323. 15. Ramis A, Ferrer L, Aranaz A, et al (1996): Mycobacterium genavense infections in canaries. Avian Dis, 40, 246- 251.
16. Schmitz A, Korbel R, Thiel S, et al (2018): High prevalence of Mycobacterium genavense within flocks of pet birds. Vet Microbiol, 218, 40-44.
17. Shitaye JL, Halouzka R, Svobodova J, et al (2010): First isolation of Mycobacterium genavense in a blue headed parrot (Pionus menstruus) important from Surinam (South America) to the Czech Republic: a case report. Vet Med- Czech, 55, 339-347.
18. Sutherland M, Courtman N, Sacks P, et al (2018): Severe leukemoid response associated with Mycobacterium genavense infection in a pet budgerigar (Melopsittacus undulatus). J Exot Pet Med, 27, 11-16.
19. Tell LA, Leutenegger CM, Larsen RS, et al (2003): Real-time polymerase chain reaction testing for the detection of Mycobacterium genavense and Mycobacterium avium complex species in avian samples. Avian Dis, 47, 1406-1415.
20. Tell LA, Woods L, Cromie RL (2001): Mycobacteriosis in birds. Rev sci tech Off int Epiz, 20, 180-203.
21. Untergasser A, Cutcutache I, Koressaar T, et al (2012): Primer3- new capabilities and interfaces. Nucleic Acids Res, 40, e115.
22. Witte CL, Hungerford LL, Papendick R, et al (2008): Investigation of characteristics and factors associated with avian mycobacteriosis in zoo birds. J Vet Diagn Invest, 20, 186–196.

Ayrıntılar

Birincil Dil	İngilizce
Konular	Veteriner Cerrahi
Bölüm	Kısa Bildiri
Yazarlar	Orkun BABACAN Balıkesir University, Kepsut Vocational School, Department of Veterinary 0000-0003-0258-1825 Türkiye Bülent BAŞ Ankara University, Faculty of Veterinary Medicine, Department of Microbiology 0000-0001-9992-8738 Türkiye Barış SAREYYÜPOĞLU Ankara University, Faculty of Veterinary Medicine, Department of Microbiology 0000-0002-2212-2610 Türkiye
Yayımlanma Tarihi	3 Mart 2020
Yayınlandığı Sayı	Yıl 2020Cilt: 67 Sayı: 2

Kaynak Göster

Bibtex	@kısa bildiri { auvfd603515, journal = {Ankara Üniversitesi Veteriner Fakültesi Dergisi}, issn = {1300-0861}, eissn = {1308-2817}, address = {}, publisher = {Ankara Üniversitesi}, year = {2020}, volume = {67}, number = {2}, pages = {201 - 204}, doi = {10.33988/auvfd.603515}, title = {PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds}, key = {cite}, author = {Babacan, Orkun and Baş, Bülent and Sareyyüpoğlu, Barış} }
APA	Babacan, O. , Baş, B. & Sareyyüpoğlu, B. (2020). PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds . Ankara Üniversitesi Veteriner Fakültesi Dergisi , 67 (2) , 201-204 . DOI: 10.33988/auvfd.603515
MLA	Babacan, O. , Baş, B. , Sareyyüpoğlu, B. "PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds" . Ankara Üniversitesi Veteriner Fakültesi Dergisi 67 (2020 ): 201-204 <http://vetjournal.ankara.edu.tr/tr/pub/issue/52756/603515>
Chicago	Babacan, O. , Baş, B. , Sareyyüpoğlu, B. "PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds". Ankara Üniversitesi Veteriner Fakültesi Dergisi 67 (2020 ): 201-204
RIS	TY - JOUR T1 - PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds AU - OrkunBabacan, BülentBaş, BarışSareyyüpoğlu Y1 - 2020 PY - 2020 N1 - doi: 10.33988/auvfd.603515 DO - 10.33988/auvfd.603515 T2 - Ankara Üniversitesi Veteriner Fakültesi Dergisi JF - Journal JO - JOR SP - 201 EP - 204 VL - 67 IS - 2 SN - 1300-0861-1308-2817 M3 - doi: 10.33988/auvfd.603515 UR - https://doi.org/10.33988/auvfd.603515 Y2 - 2019 ER -
EndNote	%0 Ankara Üniversitesi Veteriner Fakültesi Dergisi PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds %A Orkun Babacan , Bülent Baş , Barış Sareyyüpoğlu %T PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds %D 2020 %J Ankara Üniversitesi Veteriner Fakültesi Dergisi %P 1300-0861-1308-2817 %V 67 %N 2 %R doi: 10.33988/auvfd.603515 %U 10.33988/auvfd.603515
ISNAD	Babacan, Orkun , Baş, Bülent , Sareyyüpoğlu, Barış . "PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds". Ankara Üniversitesi Veteriner Fakültesi Dergisi 67 / 2 (Mart 2020): 201-204 . https://doi.org/10.33988/auvfd.603515
AMA	Babacan O. , Baş B. , Sareyyüpoğlu B. PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds. Ankara Univ Vet Fak Derg. 2020; 67(2): 201-204.
Vancouver	Babacan O. , Baş B. , Sareyyüpoğlu B. PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds. Ankara Üniversitesi Veteriner Fakültesi Dergisi. 2020; 67(2): 201-204.
IEEE	O. Babacan , B. Baş ve B. Sareyyüpoğlu , "PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds", Ankara Üniversitesi Veteriner Fakültesi Dergisi, c. 67, sayı. 2, ss. 201-204, Mar. 2020, doi:10.33988/auvfd.603515

Ankara Üniversitesi Veteriner Fakültesi Dergisi

Öz

Kaynakça

PCR detection of Mycobacterium genavense DNA in fecal samples of caged birds

Öz

Anahtar Kelimeler

Kaynakça

Ayrıntılar

Kaynak Göster

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